eland/.buildkite/pipeline.yml
Bart Broere 75c57b0775
Support Pandas 2 (#742)
* Fix test setup to match pandas 2.0 demands

* Use the now deprecated _append method

(Better solution might exist)

* Deal with numeric_only being removed in metrics test

* Skip mad metric for other pandas versions

* Account for differences between pandas versions in describe methods

* Run black

* Check Pandas version first

* Mirror behaviour of installed Pandas version when running value_counts

* Allow passing arguments to the individual asserters

* Fix for method _construct_axes_from_arguments no longer existing

* Skip mad metric if it does not exist

* Account for pandas 2.0 timestamp default behaviour

* Deal with empty vs other inferred data types

* Account for default datetime precision change

* Run Black

* Solution for differences in inferred_type only

* Fix csv and json issues

* Skip two doctests

* Passing a set as indexer is no longer allowed

* Don't validate output where it differs between Pandas versions in the environment

* Update test matrix and packaging metadata

* Update version of Python in the docs

* Update Python version in demo notebook

* Match noxfile

* Symmetry

* Fix trailing comma in JSON

* Revert some changes in setup.py to fix building the documentation

* Revert "Revert some changes in setup.py to fix building the documentation"

This reverts commit ea9879753129d8d8390b3cbbce57155a8b4fb346.

* Use PANDAS_VERSION from eland.common

* Still skip the doctest, but make the output pandas 2 instead of 1

* Still skip doctest, but switch to pandas 2 output

* Prepare for pandas 3

* Reference the right column

* Ignore output in tests but switch to pandas 2 output

* Add line comment about NBVAL_IGNORE_OUTPUT

* Restore missing line and add stderr cell

* Use non-private method instead

* Fix indentation and parameter issues

* If index is not specified, and pandas 1 is present, set it to True

From pandas 2 and upwards, index is set to None by default

* Run black

* Newer version of black might have different opinions?

* Add line comment

* Remove unused import

* Add reason for ignore statement

* Add reason for skip

---------

Co-authored-by: Quentin Pradet <quentin.pradet@elastic.co>
2025-02-04 17:43:43 +04:00

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YAML

steps:
- label: ":terminal: Lint code"
env:
PYTHON_VERSION: 3
agents:
provider: "gcp"
machineType: "n2-standard-2"
commands:
- ./.buildkite/lint-code.sh
- label: ":books: Build documentation"
env:
PYTHON_VERSION: 3.9-bookworm
agents:
provider: "gcp"
machineType: "n2-standard-2"
commands:
- ./.buildkite/build-documentation.sh
- label: ":docker: Build docker image {{ matrix.platform }}"
env:
PYTHON_VERSION: 3.11-bookworm
agents:
provider: "gcp"
machineType: "n2-standard-2"
commands:
- ./.buildkite/build-docker-images.sh
- label: "Eland :python: {{ matrix.python }} :elasticsearch: {{ matrix.stack }}"
agents:
provider: "gcp"
machineType: "n2-standard-4"
env:
PYTHON_VERSION: "{{ matrix.python }}"
PANDAS_VERSION: "{{ matrix.pandas }}"
TEST_SUITE: "xpack"
ELASTICSEARCH_VERSION: "{{ matrix.stack }}"
matrix:
setup:
# Python and pandas versions need to be added to the nox configuration too
# (in the decorators of the test method in noxfile.py)
pandas:
- '1.5.0'
- '2.2.3'
python:
- '3.12'
- '3.11'
- '3.10'
- '3.9'
stack:
- '8.16.0-SNAPSHOT'
- '8.15.2'
- '8.14.1'
command: ./.buildkite/run-tests